RECOMB-Seq
LIST OF ACCEPTED CONTRIBUTIONS
HIGHLIGHTS TRACK
CRISPRitz: Rapid, high-throughput and variant-aware in silico off-target site identification for CRISPR genome editing
Samuele Cancellieri, Matthew Canver, Nicola Bombieri, Rosalba Giugno and Luca Pinello
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Alternating EM algorithm for a bilinear model in isoform quantification from RNA-seq data
Wenjiang Deng, Tian Mou, Krishna R. Kalari, Nifang Niu, Liewei Wang, Yudi Pawitan and Trung Nghia Vu
PROCEEDINGS TRACK
Spherical thresholding improves sketching of single-cell transcriptomic heterogeneity
Van Hoan Do, Khaled Elbassioni and Stefan Canzar
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HASLR: Fast hybrid assembly of long reads
Ehsan Haghshenas, Hossein Asghari, Jens Stoye, Cedric Chauve and Faraz Hach
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BATMAN: Fast and accurate integration of single-cell RNA-Seq datasets via minimum-weight matching
Igor Mandric, Brian Hill, Malika Freund, Michael Thompson and Eran Halperin
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Scalable pairwise whole-genome homology mapping of large genomes with BubbZ
Ilia Minkin and Paul Medvedev
Hierarchically labeled database indexing allows scalable characterization of microbiomes
Filippo Utro, Niina Haiminen, Enrico Siragusa, Laura-Jayne Gardiner, Edward Seabolt, Ritesh Krishna, James Kaufman and Laxmi Parida
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Maximal perfect haplotype blocks with wildcards
Lucia Williams and Brendan Mumey
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CONNET: Accurate diploid genome consensus in de novo assembly of nanopore sequencing data via deep learning
Yifan Zhang, Chi-Man Liu, Henry Cm Leung, Ruibang Luo and Tak-Wah Lam
OVERLAY TRACK
TALC: Transcription-aware long read correction
Lucile Broseus, Aubin Thomas and William Ritchie
Metalign: Efficient alignment-based metagenomic profiling via containment min hash
Nathan Lapierre, Mohammed Alser, Eleazar Eskin, David Koslicki and Serghei Mangul
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SCAPP: An algorithm for improved plasmid assembly in metagenomes
David Pellow, Maraike Probst, Ori Furman, Alvah Zorea, Arik Segal, Itzik Mizrahi and Ron Shamir